dbCAN-seq: a database of CAZyme sequence and annotation

Gene clsuter ID: MGYG000001063_146|CGC1
Gene ID: MGYG000001063_05580
Location and strand information: 3194 - 10990 (-)
Family: GH20|CBM32|GH136
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 4.9538
Protein molecular weight: 284116.78
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001063_146|CGC1
Gene ID: MGYG000001063_05581
Location and strand information: 11470 - 13032 (-)
Family: HTH_AraC+HTH_AraC
Protein type: TF
Protein description: HTH-type transcriptional activator RhaR

Gene clsuter ID: MGYG000001063_146|CGC1
Gene ID: MGYG000001063_05582
Location and strand information: 13204 - 15030 (-)
Family: 9.B.33.1.1
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000001063_146|CGC1
Gene ID: MGYG000001063_05583
Location and strand information: 15245 - 16084 (-)
Family: 3.A.1.1.28
Protein type: TC
Protein description: L-arabinose transport system permease protein AraQ

Gene clsuter ID: MGYG000001063_146|CGC1
Gene ID: MGYG000001063_05584
Location and strand information: 16087 - 16968 (-)
Family: 3.A.1.1.28
Protein type: TC
Protein description: L-arabinose transport system permease protein AraP

Gene clsuter ID: MGYG000001063_146|CGC1
Gene ID: MGYG000001063_05585
Location and strand information: 16993 - 18291 (-)
Family: 3.A.1.1.44
Protein type: TC
Protein description: Multiple sugar-binding protein

Gene clsuter ID: MGYG000001063_146|CGC1
Gene ID: MGYG000001063_05586
Location and strand information: 18544 - 19194 (-)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000001063_146|CGC1
Gene ID: MGYG000001063_05587
Location and strand information: 19197 - 20459 (-)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000001063_146|CGC1
Gene ID: MGYG000001063_05588
Location and strand information: 20706 - 22907 (-)
Family: 2.A.6.4.2
Protein type: TC
Protein description: Protein translocase subunit SecDF

Gene clsuter ID: MGYG000001063_146|CGC1
Gene ID: MGYG000001063_05589
Location and strand information: 22971 - 23405 (-)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000001063_146|CGC1
Gene ID: MGYG000001063_05590
Location and strand information: 23694 - 25619 (-)
Family: GH127
Protein type: CAZyme
Protein description: Non-reducing end beta-L-arabinofuranosidase
Protein isoelectric point: 4.729
Protein molecular weight: 72852.96
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001063_146|CGC1
Gene ID: MGYG000001063_05591
Location and strand information: 25600 - 25821 (-)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000001063_146|CGC1
Gene ID: MGYG000001063_05592
Location and strand information: 25802 - 26635 (-)
Family: 3.A.1.1.41
Protein type: TC
Protein description: L-arabinose transport system permease protein AraQ

Gene clsuter ID: MGYG000001063_146|CGC1
Gene ID: MGYG000001063_05593
Location and strand information: 26637 - 27542 (-)
Family: 3.A.1.1.19
Protein type: TC
Protein description: Lactose transport system permease protein LacF

Gene clsuter ID: MGYG000001063_146|CGC1
Gene ID: MGYG000001063_05594
Location and strand information: 27651 - 29012 (-)
Family: SBP_bac_1
Protein type: STP
Protein description: hypothetical protein

Gene clsuter ID: MGYG000001063_146|CGC1
Gene ID: MGYG000001063_05595
Location and strand information: 29149 - 30315 (-)
Family: 3.A.1.1.2
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000001063_146|CGC1
Gene ID: MGYG000001063_05596
Location and strand information: 30356 - 31867 (-)
Family: HTH_AraC
Protein type: TF
Protein description: Chemotaxis response regulator protein-glutamate methylesterase

Gene clsuter ID: MGYG000001063_146|CGC1
Gene ID: MGYG000001063_05597
Location and strand information: 31848 - 33689 (-)
Family: 8.A.59.2.1
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000001063_146|CGC1
Gene ID: MGYG000001063_05598
Location and strand information: 33853 - 40863 (-)
Family: GH121
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 4.4168
Protein molecular weight: 255606.1
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001063_146|CGC1
Gene ID: MGYG000001063_05599
Location and strand information: 41330 - 41596 (-)
Family: null
Protein type: null
Protein description: 30S ribosomal protein S18

Gene clsuter ID: MGYG000001063_146|CGC1
Gene ID: MGYG000001063_05600
Location and strand information: 41663 - 42115 (-)
Family: 3.A.7.19.1
Protein type: TC
Protein description: Single-stranded DNA-binding protein

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CGC gene composition diagram

Gene composition table

Substrate predicted by dbCAN-PUL is arabinan download this fig

Genomic location

Protein ID	Protein Name	Type	Start	End	Strand	Signature
MGYG000001063_05580	hypothetical protein	CAZyme	3194	10990	-	GH20\| CBM32\| GH136
MGYG000001063_05581	HTH-type transcriptional activator RhaR	TF	11470	13032	-	HTH_AraC+HTH_AraC
MGYG000001063_05582	hypothetical protein	TC	13204	15030	-	9.B.33.1.1
MGYG000001063_05583	L-arabinose transport system permease protein AraQ	TC	15245	16084	-	3.A.1.1.28
MGYG000001063_05584	L-arabinose transport system permease protein AraP	TC	16087	16968	-	3.A.1.1.28
MGYG000001063_05585	Multiple sugar-binding protein	TC	16993	18291	-	3.A.1.1.44
MGYG000001063_05586	hypothetical protein	null	18544	19194	-	RloB
MGYG000001063_05587	hypothetical protein	null	19197	20459	-	AAA_21
MGYG000001063_05588	Protein translocase subunit SecDF	TC	20706	22907	-	2.A.6.4.2
MGYG000001063_05589	hypothetical protein	null	22971	23405	-	No domain
MGYG000001063_05590	Non-reducing end beta-L-arabinofuranosidase	CAZyme	23694	25619	-	GH127
MGYG000001063_05591	hypothetical protein	null	25600	25821	-	No domain
MGYG000001063_05592	L-arabinose transport system permease protein AraQ	TC	25802	26635	-	3.A.1.1.41
MGYG000001063_05593	Lactose transport system permease protein LacF	TC	26637	27542	-	3.A.1.1.19
MGYG000001063_05594	hypothetical protein	STP	27651	29012	-	SBP_bac_1
MGYG000001063_05595	hypothetical protein	TC	29149	30315	-	3.A.1.1.2
MGYG000001063_05596	Chemotaxis response regulator protein-glutamate methylesterase	TF	30356	31867	-	HTH_AraC
MGYG000001063_05597	hypothetical protein	TC	31848	33689	-	8.A.59.2.1
MGYG000001063_05598	hypothetical protein	CAZyme	33853	40863	-	GH121
MGYG000001063_05599	30S ribosomal protein S18	null	41330	41596	-	Ribosomal_S18
MGYG000001063_05600	Single-stranded DNA-binding protein	TC	41663	42115	-	3.A.7.19.1
Protein ID	Protein Name	Type	Start	End	Strand	Signature